
Daniel Charbonneau
- Assistant Professor of Practice, School of Information
Contact
- (520) 621-7509
- Richard P. Harvill Building, Rm. 409
- Tucson, AZ 85721
- dcharbonneau@arizona.edu
Degrees
- Ph.D. Entomology and Insect Science
- The University of Arizona, Tucson, Arizona, United States
- Investigating the ecological and evolutionary consequences of high levels of inactivity in the ant Temnothorax rugatulus
- M.S. Biology
- University of Quebec in Outaouais, Ripon, QC, Canada
- Predicting defoliation intensity of forest tent caterpillars in relation to landscape and local scale forest characteristics
Interests
No activities entered.
Courses
2025-26 Courses
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Computational Thinking & Doing
ISTA 130 (Fall 2025) -
Data Engineering
ISTA 322 (Fall 2025)
2024-25 Courses
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Data Engineering
ISTA 322 (Summer I 2025) -
Computational Thinking & Doing
ISTA 130 (Spring 2025) -
Data Engineering
ISTA 322 (Spring 2025) -
Computational Thinking & Doing
ISTA 130 (Fall 2024) -
Data Engineering
ISTA 322 (Fall 2024)
2023-24 Courses
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Data Engineering
ISTA 322 (Summer I 2024) -
Computational Thinking & Doing
ISTA 130 (Spring 2024) -
Data Engineering
ISTA 322 (Spring 2024) -
Computational Thinking & Doing
ISTA 130 (Fall 2023) -
Data Engineering
ISTA 322 (Fall 2023) -
Senior Capstone
ISTA 498 (Fall 2023)
2022-23 Courses
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Data Engineering
ISTA 322 (Summer I 2023) -
Computational Thinking & Doing
ISTA 130 (Spring 2023) -
How science works
ECOL 250 (Spring 2023) -
Senior Capstone
ISTA 498 (Spring 2023) -
Computational Thinking & Doing
ISTA 130 (Fall 2022) -
Senior Capstone
ISTA 498 (Fall 2022)
2021-22 Courses
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Computational Thinking & Doing
ISTA 130 (Summer I 2022) -
Computational Thinking & Doing
ISTA 130 (Spring 2022) -
Data Engineering
ISTA 322 (Spring 2022) -
Data Engineering
ISTA 322 (Fall 2021)
2016-17 Courses
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Intro Biology I Lab
MCB 181L (Spring 2017) -
Intro Biology I Lab
MCB 181L (Fall 2016)
2015-16 Courses
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Intro Biology II Lab
ECOL 182L (Spring 2016)
Scholarly Contributions
Chapters
- Charbonneau, D., Dornhaus, A., & Bengston, S. (2021). Temnothorax. In NA. doi:10.1007/978-3-030-28102-1_125
Journals/Publications
- Chen, J., Guo, X., Charbonneau, D., Azizi, A., Fewell, J., & Kang, Y. (2024). Dynamics of Information Flow and Task Allocation of Social Insect Colonies: Impacts of Spatial Interactions and Task Switching. Bulletin of mathematical biology, 86(5), 50.More infoModels of social interaction dynamics have been powerful tools for understanding the efficiency of information spread and the robustness of task allocation in social insect colonies. How workers spatially distribute within the colony, or spatial heterogeneity degree (SHD), plays a vital role in contact dynamics, influencing information spread and task allocation. We used agent-based models to explore factors affecting spatial heterogeneity and information flow, including the number of task groups, variation in spatial arrangements, and levels of task switching, to study: (1) the impact of multiple task groups on SHD, contact dynamics, and information spread, and (2) the impact of task switching on SHD and contact dynamics. Both models show a strong linear relationship between the dynamics of SHD and contact dynamics, which exists for different initial conditions. The multiple-task-group model without task switching reveals the impacts of the number and spatial arrangements of task locations on information transmission. The task-switching model allows task-switching with a probability through contact between individuals. The model indicates that the task-switching mechanism enables a dynamical state of task-related spatial fidelity at the individual level. This spatial fidelity can assist the colony in redistributing their workforce, with consequent effects on the dynamics of spatial heterogeneity degree. The spatial fidelity of a task group is the proportion of workers who perform that task and have preferential walking styles toward their task location. Our analysis shows that the task switching rate between two tasks is an exponentially decreasing function of the spatial fidelity and contact rate. Higher spatial fidelity leads to more agents aggregating to task location, reducing contact between groups, thus making task switching more difficult. Our results provide important insights into the mechanisms that generate spatial heterogeneity and deepen our understanding of how spatial heterogeneity impacts task allocation, social interaction, and information spread.
- Qiu, Z., Kang, Y., Feng, T., & Charbonneau, D. (2021). Dynamics of task allocation in social insect colonies: scaling effects of colony size versus work activities. Journal of Mathematical Biology, 82(5), 42-42. doi:10.1007/s00285-021-01589-zMore infoThe mechanisms through which work is organized are central to understanding how complex systems function. Previous studies suggest that task organization can emerge via nonlinear dynamical processes wherein individuals interact and modify their behavior through simple rules. However, there is very limited theory about how those processes are shaped by behavioral variation within social groups. In this work, we propose an adaptive modeling framework on task allocation by incorporating variation both in task performance and task-related metabolic rates. We study the scaling effects of colony size on the resting probability as well as task allocation. We also numerically explore the effects of stochastic noise on task allocation in social insect colonies. Our theoretical and numerical results show that: (a) changes in colony size can regulate the probability of colony resting and the allocation of tasks, and the direction of regulation depends on the nonlinear metabolic scaling effects of tasks; (b) increased response thresholds may cause colonies to rest in varied patterns such as periodicity. In this case, we observed an interesting bubble phenomenon in the task allocation of social insect colonies for the first time; (c) stochastic noise can cause work activities and task demand to fluctuate within a range, where the amplitude of the fluctuation is positively correlated with the intensity of noise.
- Leitner, N., Charbonneau, D., Gronenberg, W., & Dornhaus, A. (2019). Peripheral sensory organs vary among ant workers but variation does not predict division of labor. Behavioural Processes, 158. doi:10.1016/j.beproc.2018.10.016More infoThe neural mechanisms underlying behavioral variation among individuals are not well understood. Differences among individuals in sensory sensitivity could limit the environmental stimuli to which an individual is capable of responding and have, indeed, been shown to relate to behavioral differences in different species. Here, we show that ant workers in Temnothorax rugatulus differ considerably in the number of antennal sensory structures, or sensilla (by 45% in density and over 100% in estimated total number). A larger quantity of sensilla may reflect a larger quantity of underlying sensory neurons. This would increase the probability that a given set of neurons in the antenna detects an environmental stimulus and becomes excited, thereby eliciting the expression of a behavior downstream at lower stimulus levels than an individual with comparatively fewer sensilla. Individual differences in antennal sensilla density, however, did not predict worker activity level or performance of any task, suggesting either that variation in sensilla density does not, in fact, reflect variation in sensory sensitivity or that individual sensory response thresholds to task-associated stimuli do not determine task allocation as is commonly assumed, at least in this social insect. More broadly, our finding that even closely related individuals can differ strongly in peripheral sensory organ elaboration suggests that such variation in sensory organs could underlie other cases of intraspecific behavioral variation.
- Charbonneau, D., Poff, C., Nguyen, H., Shin, M., Kierstead, K., & Dornhaus, A. (2017). Who Are the "Lazy" Ants? The Function of Inactivity in Social Insects and a Possible Role of Constraint: Inactive Ants Are Corpulent and May Be Young and/or Selfish. Integrative and comparative biology, 57(3). doi:10.1093/icb/icx029More infoSocial insect colonies are commonly thought of as highly organized and efficient complex systems, yet high levels of worker inactivity are common. Although consistently inactive workers have been documented across many species, very little is known about the potential function or costs associated with this behavior. Here we ask what distinguishes these "lazy" individuals from their nestmates. We obtained a large set of behavioral and morphological data about individuals, and tested for consistency with the following evolutionary hypotheses: that inactivity results from constraint caused by worker (a) immaturity or (b) senescence; that (c) inactive workers are reproducing; that inactive workers perform a cryptic task such as (d) acting as communication hubs or (e) food stores; and that (f) inactive workers represent the "slow-paced" end of inter-worker variation in "pace-of-life." We show that inactive workers walk more slowly, have small spatial fidelity zones near the nest center, are more corpulent, are isolated in colony interaction networks, have the smallest behavioral repertoires, and are more likely to have oocytes than other workers. These results are consistent with the hypotheses that inactive workers are immature and/or storing food for the colony; they suggest that workers are not inactive as a consequence of senescence, and that they are not acting as communication hubs. The hypotheses listed above are not mutually exclusive, and likely form a "syndrome" of behaviors common to inactive social insect workers. Their simultaneous contribution to inactivity may explain the difficulty in finding a simple answer to this deceptively simple question.
- Charbonneau, D., Sasaki, T., & Dornhaus, A. (2017). Who needs ‘lazy’ workers? Inactive workers act as a ‘reserve’ labor force replacing active workers, but inactive workers are not replaced when they are removed. PLoS ONE, 12(9). doi:10.1371/journal.pone.0184074More infoSocial insect colonies are highly successful, self-organized complex systems. Surprisingly however, most social insect colonies contain large numbers of highly inactive workers. Although this may seem inefficient, it may be that inactive workers actually contribute to colony function. Indeed, the most commonly proposed explanation for inactive workers is that they form a ‘reserve’ labor force that becomes active when needed, thus helping mitigate the effects of colony workload fluctuations or worker loss. Thus, it may be that inactive workers facilitate colony flexibility and resilience. However, this idea has not been empirically confirmed. Here we test whether colonies of Temnothorax rugatulus ants replace highly active (spending large proportions of time on specific tasks) or highly inactive (spending large proportions of time completely immobile) workers when they are experimentally removed. We show that colonies maintained pre-removal activity levels even after active workers were removed, and that previously inactive workers became active subsequent to the removal of active workers. Conversely, when inactive workers were removed, inactivity levels decreased and remained lower post-removal. Thus, colonies seem to have mechanisms for maintaining a certain number of active workers, but not a set number of inactive workers. The rapid replacement (within 1 week) of active workers suggests that the tasks they perform, mainly foraging and brood care, are necessary for colony function on short timescales. Conversely, the lack of replacement of inactive workers even 2 weeks after their removal suggests that any potential functions they have, including being a ‘reserve’, are less important, or auxiliary, and do not need immediate recovery. Thus, inactive workers act as a reserve labor force and may still play a role as food stores for the colony, but a role in facilitating colony-wide communication is unlikely. Our results are consistent with the often cited, but never yet empirically supported hypothesis that inactive workers act as a pool of ‘reserve’ labor that may allow colonies to quickly take advantage of novel resources and to mitigate worker loss.
- Leighton, G., Charbonneau, D., & Dornhaus, A. (2017). Task switching is associated with temporal delays in Temnothorax rugatulus ants. Behavioral Ecology, 28(1). doi:10.1093/beheco/arw162More infoThe major evolutionary transitions often result in reorganization of biological systems, and a component of such reorganization is that individuals within the system specialize on performing certain tasks, resulting in a division of labor. Although the traditional benefit of division of labor is thought to be a gain in work efficiency, one alternative benefit of specialization is avoiding temporal delays associated with switching tasks. While models have demonstrated that costs of task switching can drive the evolution of division of labor, little empirical support exists for this hypothesis. We tested whether there were task-switching costs in Temnothorax rugatulus. We recorded the behavior of every individual in 44 colonies and used this dataset to identify each instance where an individual performed a task, spent time in the interval (i.e., inactive, wandering inside, and self-grooming), and then performed a task again. We compared the interval time where an individual switched task type between that first and second bout of work to instances where an individual performed the same type of work in both bouts. In certain cases, we find that the interval time was significantly shorter if individuals repeated the same task. We find this time cost for switching to a new behavior in all active worker groups, that is, independently of worker specialization. These results suggest that task-switching costs may select for behavioral specialization.
- Charbonneau, D., & Dornhaus, A. (2015). When doing nothing is something. How task allocation strategies compromise between flexibility, efficiency, and inactive agents. Journal of Bioeconomics, 17(3). doi:10.1007/s10818-015-9205-4More infoWe expect that human organizations and cooperative animal groups should be optimized for collective performance. This often involves the allocation of different individuals to different tasks. Social insect colonies are a prime example of cooperative animal groups that display sophisticated mechanisms of task allocation. Here we discuss which task allocation strategies may be adapted to which environmental and social conditions. Effective and robust task allocation is a hard problem, and in many biological and engineered complex systems is solved in a decentralized manner: human organizations may benefit from insights into what makes decentralized strategies of group organization effective. In addition, we often find considerable variation among individuals in how much work they appear to contribute, despite the fact that individual selfishness in social insects is low and optimization occurs largely at the group level. We review possible explanations for uneven workloads among workers, including limitations on individual information collection or constraints of task allocation efficiency, such as when there is a mismatch between the frequency of fluctuations in demand for work and the speed at which workers can be reallocated. These processes are likely to apply to any system in which worker agents are allocated to tasks with fluctuating demand, and should therefore be instructive to understanding optimal task allocation and inactive workers in any distributed system. Some of these processes imply that a certain proportion of inactive workers can be an adaptive strategy for collective organization.
- Charbonneau, D., & Dornhaus, A. (2015). Workers ‘specialized’ on inactivity: Behavioral consistency of inactive workers and their role in task allocation. Behavioral Ecology and Sociobiology, 69(9). doi:10.1007/s00265-015-1958-1More infoSocial insect colonies are often considered to be highly efficient collective systems, with division of labor at the root of their ecological success. However, in many species, a large proportion of a colony’s workers appear to spend their time completely inactive. The role of this inactivity for colony function remains unclear. Here, we investigate how inactivity is distributed among workers and over time in the ant Temnothorax rugatulus. We show that the level of inactivity is consistent for individual workers, but differs significantly among workers, that is, some workers effectively specialize on ‘inactivity’. We also show that workers have circadian rhythms, although intra-nest tasks tend to be performed uniformly across the whole day. Differences in circadian rhythms, or workers taking turns resting (i.e., working in shifts), cannot explain the observation that some workers are consistently inactive. Using extensive individual-level data to describe the overall structure of division of labor, we show that ‘inactive workers’ form a group distinct from other task groups. Hierarchical clustering suggests that inactivity is the primary variable in differentiating both workers and tasks. Our results underline the importance of inactivity as a behavioral state and the need for further studies on its evolution.
- Charbonneau, D., Hillis, N., & Dornhaus, A. (2015). ‘Lazy’ in nature: ant colony time budgets show high ‘inactivity’ in the field as well as in the lab. Insectes Sociaux, 62(1). doi:10.1007/s00040-014-0370-6More infoSocial insect colonies are models for complex systems with sophisticated, efficient, and robust allocation of workers to necessary tasks. Despite this, it is commonly reported that many workers appear inactive. Could this be an artifact resulting from the simplified laboratory conditions in most studies? Here, we test whether the time allocated to different behavioral states differs between field and laboratory colonies of Temnothorax rugatulus ants. Our results show no difference in colony time budgets between laboratory and field observations for any of the observed behaviors, including ‘inactivity’. This suggests that, on the timescale of a few months, laboratory conditions do not impact task allocation at the colony level. We thus provide support for a previously untested assumption of laboratory studies on division of labor in ants. High levels of inactivity, common in social insects, thus appear to not be a laboratory artifact, but rather a naturally occurring trait.
- Charbonneau, D., Lorenzetti, F., Doyon, F., & Mauffette, Y. (2012). The influence of stand and landscape characteristics on forest tent caterpillar (Malacosoma disstria) defoliation dynamics: The case of the 1999-2002 outbreak in northwestern Quebec. Canadian Journal of Forest Research, 42(10). doi:10.1139/x2012-126More infoThe forest tent caterpillar (Malacosoma disstria Hbn.) is an eruptive forest insect common across North America and an important defoliator of trembling aspen (Populus tremuloides Michx.). Forest stands having suffered severe defoliations by the forest tent caterpillar over multiple years are known to incur reduced tree growth and increased tree mortality. In this study, we developed a predictive model of forest tent caterpillar defoliation dynamics using local and contextual variables expressing forest composition and structure, and their heterogeneity, at different scales. Of all scales considered (500, 1000, 1500, and 2000 m), contextual variables at 1500 m were found to have the greatest effect on defoliation dynamics. At this scale, we found that a greater proportion of preferred host trees in the landscape increased defoliation severity, but duration was modulated by compositional heterogeneity, where persistence was reduced in highly heterogeneous landscapes. Indeed, the likelihood of a single year of defoliation was much greater in highly diverse landscapes than the likelihood of multiple years of defoliation. These findings are consistent with ecological theory. Contrary to the expected result that older trees would be most susceptible, we found that "middle-aged" trees (~50 years) were most likely to be defoliated.
Proceedings Publications
- Charbonneau, D., Jackson, J. A., Diel, D. D., Boskovic, J. D., & Pratt, S. (2021). Application of Bio-Inspired Sensing, Perception and Control Technology to Autonomous UAV Missions. In NA.
- Nguyen, H., Fasciano, T., Charbonneau, D., Dornhaus, A., & Shin, M. (2014). Data association based ant tracking with interactive error correction. In IEEE Winter Conference on Applications of Computer Vision.More infoThe tracking of ants in video is important for the analysis of their complex group behavior. However, the manual analysis of these videos is tedious and time consuming. Automated tracking methods tend to drift due to frequent occlusions during their interactions and similarity in appearance. Semi-automated tracking methods enable corrections of tracking errors by incorporating user interaction. Although it is much lower than manual analysis, the required user time of the existing method is still typically 23 times the actual video length. In this paper, we propose a new semi-automated method that achieves similar accuracy while reducing the user interaction time by (1) mitigating user wait time by incorporating a data association tracking method to separate the tracking from user correction, and (2) minimizing the number of candidates visualized for user during correction. This proposed method is able to reduce the user interaction time by 67% while maintaining the accuracy within 3% of the previous semi-automated method [11]. © 2014 IEEE.